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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs3862346 chr11:49605177 C/A FOLH1B chr11:89372395-89431886:+ -0.35 -6.27 8.12E-10 Box Plot
THCA rs3862350 chr11:49595912 A/C FOLH1B chr11:89372395-89431886:+ -0.35 -6.3 6.81E-10 Box Plot
THCA rs3865264 chr17:15618623 G/T ZNF286B chr17:18561742-18585575:- 0.7 13.56 1.09E-35 Box Plot
THCA rs3865271 chr17:15657435 A/G ZNF286B chr17:18561742-18585575:- 0.39 8.18 2.55E-15 Box Plot
THCA rs3872563 chr11:49171721 T/C FOLH1B chr11:89372395-89431886:+ -0.38 -6.56 1.38E-10 Box Plot
THCA rs3872578 chr11:49208862 G/T FOLH1B chr11:89372395-89431886:+ -0.37 -6.49 2.19E-10 Box Plot
THCA rs3883068 chr15:31012794 A/G CHRNA7 chr15:32215641-32465219:+ 0.31 7.23 1.92E-12 Box Plot
THCA rs3886108 chr10:51818201 G/A FAM21B chr10:47894023-47949412:+ 0.59 7.61 1.47E-13 Box Plot
THCA rs388907 chr21:44000366 A/G TLN1 chr9:35696945-35732392:- 0.22 6.06 2.78E-9 Box Plot
THCA rs3891524 chr10:45971689 C/A AGAP8 chr10:51224681-51371321:- 0.44 6.99 9.11E-12 Box Plot
THCA rs3905736 chr15:31045714 T/C CHRNA7 chr15:32215641-32465219:+ 0.3 7.01 8.36E-12 Box Plot
THCA rs3905737 chr15:31045719 A/T CHRNA7 chr15:32215641-32465219:+ 0.31 7.01 7.91E-12 Box Plot
THCA rs3907576 chr11:49536639 A/C FOLH1B chr11:89372395-89431886:+ -0.35 -6.44 3.0E-10 Box Plot
THCA rs390764 chr6:27782535 C/T BTN3A2 chr6:26365387-26378548:+ -0.52 -9.14 1.83E-18 Box Plot
THCA rs390764 chr6:27782535 C/T ZFP57 chr6:29640169-29648887:- 0.58 7.03 7.03E-12 Box Plot